Archive for the ‘bioruby_gene_duplications’ Category

GSoC 2010: Implementing SDI Project Updates: http://wiki.github.com/srayburn/bioruby/gsoc-2010-implementing-sdi-project-updates Advertisements


Some useful references for our “Implementation of algorithm to infer gene duplications in BioRuby” proposal. SDI algorithm: Zmasek and Eddy (2001): A simple algorithm to infer gene duplication and speciation events on a gene tree Classic paper on the significance of gene duplications, phylogenomics: Eisen (1998): Phylogenomics: Improving Functional Predictions for Uncharacterized Genes by Evolutionary Analysis […]


Projects

25Mar10

Currently, I am the mentor/co-mentor for two projects: Implementation of algorithm to infer gene duplications in BioRuby Ruby 1.9.2 support of BioRuby